Software Skills for Systems Neuroscience

SWC/GCNU Neuroinformatics Unit

About us

Neuroinformatics Unit

(Systems) neuroscience & machine learning research software engineering group

Team

Team

Laura Porta

Chang Huan lo

Joe Ziminski

Alessandro Felder

Niko Sirmpilatze

Igor Tatarnikov

Sofía Miñano

What we do

  • Data analysis software (anatomy, electrophysiology, functional imaging, behaviour)
  • Data management (specifications, tools)
  • Collaborations (data science, software development, productionisation)

Current projects

  • Data standardisation and management
  • Developer tools
  • Modelling
  • Extracellular electrophysiology analysis
  • Video behavioural analysis
  • Multiphoton analysis
  • Computational neuroanatomy

More details

neuroinformatics.dev

Course details

Course schedule

Tuesday, September 30th - Introduction to Python (1)

Wednesday, October 1st - Introduction to Python (2)

Thursday, October 2nd - Data management and sharing

Friday, October 3rd - Version control and software development best practices

Wednesday, October 8th - Video behavioural analysis

Thursday, October 9th - Linux and high-performance computing - General microscopy

Monday, October 13th - Histology analysis

Full details

software-skills.neuroinformatics.dev/courses/software-skills

Any questions?