7 Spike sorting - coding

OSSS Ephys Course 2026

1 Preface
2 Setting up the repository
3 Introduction to electrophysiology
4 Pipeline walkthrough
5 Preprocessing - theory
6 Preprocessing - coding
7 Spike sorting - coding
Neural analysis with Pynapple
Concept Notes
8 References
9 Course Planning (temp, to remove)
10 Visualization and manual curation
11 Course data

7 Spike sorting - coding

For the coding section we will use the: notebooks/spike-sorting-coding.ipynb

6 Preprocessing - coding

Neural analysis with Pynapple